Cohort validation pack
Generation Scotland
Generation Scotland: Scottish Family Health Study
Generated 6 Oct 2026, 10:37 · ID 12
Instructions for reviewers
- Review each field against your knowledge of this cohort. Mark Accurate if the value is right, Needs correction if it is wrong or inaccurate (add notes), Not sure if you cannot verify it, or Does not apply if the field is not relevant.
- Evidence shown is from our source registry. Fields marked No source yet hold values we could not yet pin to a document — those were AI-inferred and need your input most. Fields marked Searched — not published are ones we looked for and could not find publicly; the note lists where we checked.
- Your selections and notes are kept in this browser tab only (not sent to the database). Print or save as PDF when finished, then return it to the DIGIT team.
Overview
108
Total fields
89
Field-cited
0
Whole-record source only
2
AI-inferred, no source yet
12
Searched — not published
14
No value held
14
Needs review
Source coverage
Summary of how well fields in this pack are linked to evidence.
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Field-level source coverage Optional | 89 of 103 reviewable fields are cited to a source (86%) · 2 with no source yet · 12 searched — not published · 14 with no value held | Computed | No citation linked to this field yet. | No response selected | No notes |
Identity and ownership
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Short name Required | Generation Scotland | Field-cited |
| No response selected | No notes |
Full name Required | Generation Scotland: Scottish Family Health Study | Field-cited |
| No response selected | No notes |
Managing organisation Recommended | University of Edinburgh | Field-cited |
| No response selected | No notes |
Primary site Recommended | University of Edinburgh (site #12) | Field-cited |
| No response selected | No notes |
Website URL Recommended | https://generation-scotland.ed.ac.uk/ | Field-cited |
| No response selected | No notes |
Catalogue of Mental Health Measures URL Recommended | https://www.cataloguementalhealth.ac.uk/GSSFHS | Field-cited |
| No response selected | No notes |
Contact name Recommended | No value held | Not published |
| No response selected | No notes |
Contact email Recommended | No value held | Not published |
| No response selected | No notes |
Summary and status
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Description Required | Family-based longitudinal cohort across Scotland combining questionnaire, cognitive, physical and multi-omics data with NHS record linkage and recontact for follow-on studies. | Field-cited |
| No response selected | No notes |
Total N Required | 41,211 | Field-cited |
| No response selected | No notes |
Total N qualifier Recommended | approximate | Field-cited |
| No response selected | No notes |
Year established Recommended | 2006 | Field-cited |
| No response selected | No notes |
Active cohort Recommended | Yes | Field-cited |
| No response selected | No notes |
Ongoing recruitment Recommended | Yes | Field-cited |
| No response selected | No notes |
Refreshed cohort Recommended | Yes | Field-cited |
| No response selected | No notes |
Recontact success rate Recommended | No value held | Not published |
| No response selected | No notes |
Retention rate Recommended | No value held | Not published |
| No response selected | No notes |
Published references Recommended | doi:10.1093/ije/dys084, doi:10.1136/bmjopen-2024-084719 | Field-cited |
| No response selected | No notes |
Notes Recommended | Includes original GS:SFHS recruitment plus NextGenScot expansion with continued linkage and recontact studies. | Field-cited |
| No response selected | No notes |
3D cohort mapping
Consent, characterisation, and data availability axes used on the cohort map.
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Consent level (axis) Required | 3 — Broad consent (recontactable for future studies) | Field-cited |
| No response selected | No notes |
Characterisation depth (axis) Required | 3 — Multi-domain MH characterisation | Field-cited |
| No response selected | No notes |
Data availability (axis) Required | 4 — Multi-modal | Field-cited |
| No response selected | No notes |
Cohort map group (derived) Recommended | Group 1 | Internal | Internal catalogue field | — | — |
Population type Recommended | General population | Not published |
| No response selected | No notes |
Industry engagement status Recommended | Unknown | Not published |
| No response selected | No notes |
Parent cohort / programme Recommended | No value held | No source yet | No citation linked to this field yet. | No response selected | No notes |
TWiCs eligible Recommended | No | Field-cited |
| No response selected | No notes |
Data modalities
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Questionnaire / interview Recommended | Yes | Field-cited |
| No response selected | No notes |
Cognitive testing Recommended | Yes | Field-cited |
| No response selected | No notes |
Physical measures Recommended | Yes | Field-cited |
| No response selected | No notes |
Biosamples Recommended | Yes | Field-cited |
| No response selected | No notes |
Genomic data Recommended | Yes | Field-cited |
| No response selected | No notes |
Omics Recommended | Yes | Field-cited |
| No response selected | No notes |
Imaging Recommended | Yes | Field-cited |
| No response selected | No notes |
Wearable / sensor Recommended | No | Field-cited |
| No response selected | No notes |
Digital phenotyping Recommended | No | Field-cited |
| No response selected | No notes |
Linked health records Recommended | Yes | Field-cited |
| No response selected | No notes |
Biosample types Recommended | blood, saliva, urine | Field-cited |
| No response selected | No notes |
Genotyping platform Recommended | Illumina HumanOmniExpressExome | Field-cited |
| No response selected | No notes |
Imaging modalities Recommended | structural_mri, fmri, dwi | Field-cited |
| No response selected | No notes |
Mental health measures Recommended | GHQ-28, SCID, Mood Disorder Questionnaire | Field-cited |
| No response selected | No notes |
Data subcategories
Structured modality and subcategory rows used alongside the high-level data-type flags.
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Data modality: Blood sample Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · biosamples · biospecimen type · parent: Biospecimen collection · Blood sample resource | Field-cited |
| No response selected | No notes |
Data modality: Saliva sample Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · biosamples · biospecimen type · parent: Biospecimen collection · Saliva sample resource | Field-cited |
| No response selected | No notes |
Data modality: Urine sample Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · biosamples · biospecimen type · parent: Biospecimen collection · Urine sample resource | Field-cited |
| No response selected | No notes |
Data modality: Biospecimen collection Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · biosamples · category marker · Blood, saliva, urine and DNA-related sample resources | Field-cited |
| No response selected | No notes |
Data modality: Cognitive assessment data Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · cognitive measures · category marker · Cognitive function data | Field-cited |
| No response selected | No notes |
Data modality: Genotyping array Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · genomics · derived genomic data · Illumina HumanOmniExpressExome genotyping | Field-cited |
| No response selected | No notes |
Data modality: Brain MRI Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · imaging · category marker · Multimodal brain imaging subset | Field-cited |
| No response selected | No notes |
Data modality: Diffusion MRI Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · imaging · imaging modality · parent: Brain MRI · Diffusion MRI | Field-cited |
| No response selected | No notes |
Data modality: Functional MRI Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · imaging · imaging modality · parent: Brain MRI · Resting-state fMRI | Field-cited |
| No response selected | No notes |
Data modality: Structural MRI Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · imaging · imaging modality · parent: Brain MRI · T1-weighted MRI | Field-cited |
| No response selected | No notes |
Data modality: Linked NHS records Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · linked health records · category marker · Routine NHS dataset linkage | Field-cited |
| No response selected | No notes |
Data modality: Linked GP records Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · linked health records · linked record type · parent: Linked NHS records · General practice linked data | Field-cited |
| No response selected | No notes |
Data modality: Linked death registry Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · linked health records · linked record type · parent: Linked NHS records · NRS deaths data | Field-cited |
| No response selected | No notes |
Data modality: DNA methylation Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · omics · derived omics data · Blood-based DNA methylation data | Field-cited |
| No response selected | No notes |
Data modality: Proteomics Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · omics · derived omics data · Proteomics data | Field-cited |
| No response selected | No notes |
Data modality: Clinical / physical measurements Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · physical measures · category marker · Height, weight, heart rate, blood pressure, ECG and body composition | Field-cited |
| No response selected | No notes |
Data modality: Anthropometry Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · physical measures · clinical physical measure · parent: Clinical / physical measurements · Height and weight | Field-cited |
| No response selected | No notes |
Data modality: Blood pressure / vitals Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · physical measures · clinical physical measure · parent: Clinical / physical measurements · Systolic and diastolic blood pressure | Field-cited |
| No response selected | No notes |
Data modality: Body composition Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · physical measures · clinical physical measure · parent: Clinical / physical measurements · Body composition analysis | Field-cited |
| No response selected | No notes |
Data modality: Questionnaire / interview data Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · questionnaires · category marker · Health and wellbeing questionnaire data across the life course | Field-cited |
| No response selected | No notes |
Data modality: GHQ-12 / GHQ Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · questionnaires · questionnaire instrument · parent: Questionnaire / interview data · General Health Questionnaire family instruments · Existing seed stores GHQ-28; grouped under GHQ modality. | Field-cited |
| No response selected | No notes |
Data modality: Mood Disorder Questionnaire Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · questionnaires · questionnaire instrument · parent: Questionnaire / interview data · Mood Disorder Questionnaire | Field-cited |
| No response selected | No notes |
Data modality: SCID Recommended Confirm this row is correctly typed as a category marker, named instrument/interview, biospecimen type, assay/data product, imaging modality, sensor stream, or linked-record type; add missing named instruments/sample types where known. | available · questionnaires · structured interview · parent: Questionnaire / interview data · Structured Clinical Interview for DSM Disorders | Field-cited |
| No response selected | No notes |
Consent and use permissions
Specific use permissions separate from the 3D consent-level axis.
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Consent/use: Biosample research use Recommended Confirm status, population scope, whether the permission is a DUO-style restriction/permission or a local operational permission, and whether academic and industry/commercial use differ. | permitted · biosample use · local operational permission · Participants with samples · Broad consent includes use of data and samples. | Field-cited |
| No response selected | No notes |
Consent/use: Industry / commercial research considered Recommended Confirm status, population scope, whether the permission is a DUO-style restriction/permission or a local operational permission, and whether academic and industry/commercial use differ. | permitted · commercial use · local operational permission · Consented participants · Cohort profile states consent includes commercial research. | Field-cited |
| No response selected | No notes |
Consent/use: Health record linkage permitted Recommended Confirm status, population scope, whether the permission is a DUO-style restriction/permission or a local operational permission, and whether academic and industry/commercial use differ. | permitted · data linkage · local operational permission · Consented participants · NHS linkage possible for a large participant subset. | Field-cited |
| No response selected | No notes |
Consent/use: Data sharing permitted Recommended Confirm status, population scope, whether the permission is a DUO-style restriction/permission or a local operational permission, and whether academic and industry/commercial use differ. | restricted · data sharing · local operational permission · Approved researchers · Data sharing requires access committee approval. | Field-cited |
| No response selected | No notes |
Consent/use: Ethics approval required Recommended Confirm status, population scope, whether the permission is a DUO-style restriction/permission or a local operational permission, and whether academic and industry/commercial use differ. | restricted · governance · duo modifier · Commercial and academic users · Access remains subject to Generation Scotland Access Committee review. | Field-cited |
| No response selected | No notes |
Consent/use: Participant recontact permitted Recommended Confirm status, population scope, whether the permission is a DUO-style restriction/permission or a local operational permission, and whether academic and industry/commercial use differ. | permitted · recontact · local operational permission · Consented participants · Broad consent includes recontact. | Field-cited |
| No response selected | No notes |
Consent/use: Health / medical / biomedical research use Recommended Confirm status, population scope, whether the permission is a DUO-style restriction/permission or a local operational permission, and whether academic and industry/commercial use differ. | permitted · research use · duo permission · DUO:0000002 · Consented participants · Broad consent covers wide medical research uses. | Field-cited |
| No response selected | No notes |
Consent/use: Approach for trials permitted Recommended Confirm status, population scope, whether the permission is a DUO-style restriction/permission or a local operational permission, and whether academic and industry/commercial use differ. | restricted · trial approach · local operational permission · Consented participants · Recontact is permitted; trial participation would require study-specific consent. | Field-cited |
| No response selected | No notes |
Access pathways
One or more routes by which researchers can request or analyse data.
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Access pathway: Direct application Recommended Confirm route, access level, environment type, DAC review, collaboration, data sharing agreement, output checking, platform, timeline, cost, URL, and whether multiple routes are possible. | available on application · access level: controlled · environment: secure download · DAC review required · data sharing agreement required · Generation Scotland Access Request · Charges may apply · https://generation-scotland.ed.ac.uk/for-researchers/access · Applications are reviewed by the Generation Scotland Access Committee. | Field-cited |
| No response selected | No notes |
Access pathway: Managed access / DAC Recommended Confirm route, access level, environment type, DAC review, collaboration, data sharing agreement, output checking, platform, timeline, cost, URL, and whether multiple routes are possible. | available on application · access level: controlled · environment: secure download · DAC review required · data sharing agreement required · Generation Scotland Access Committee · Charges may apply · https://generation-scotland.ed.ac.uk/for-researchers/access · Access committee review is required before data release. | Field-cited |
| No response selected | No notes |
Within-cohort coverage
Aggregate counts or percentages showing how broadly data, consent, or access characteristics apply within the cohort.
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Coverage: DNA methylation data Recommended Confirm numerator, denominator, unit type, exactness qualifiers, denominator type, basis, as-of date/release, source wording, and whether the metric is marginal, joint, conditional, or a release total. | 18,869 · unit: participants · denominator: unknown · basis: available to researchers · status: available · scope: marginal · source value: 18,869 participants and 78% · Source reports 18,869 participants and 78%; denominator should be confirmed by cohort owner. | Field-cited |
| No response selected | No notes |
Coverage: Genotype array data Recommended Confirm numerator, denominator, unit type, exactness qualifiers, denominator type, basis, as-of date/release, source wording, and whether the metric is marginal, joint, conditional, or a release total. | 20,026 · unit: participants · denominator: unknown · basis: available to researchers · status: available · scope: marginal · source value: 20,026 participants and 83% · Source reports 20,026 participants and 83%; denominator should be confirmed by cohort owner. | Field-cited |
| No response selected | No notes |
Coverage: Multimodal brain imaging Recommended Confirm numerator, denominator, unit type, exactness qualifiers, denominator type, basis, as-of date/release, source wording, and whether the metric is marginal, joint, conditional, or a release total. | 1,069 · unit: participants · denominator: unknown · basis: available to researchers · status: available · scope: marginal · source value: 1,069 participants · Marginal imaging subset count. | Field-cited |
| No response selected | No notes |
Coverage: Routine NHS linkage possible Recommended Confirm numerator, denominator, unit type, exactness qualifiers, denominator type, basis, as-of date/release, source wording, and whether the metric is marginal, joint, conditional, or a release total. | 22,402 · unit: participants · denominator: unknown · basis: linked · status: available · scope: marginal · source value: 22,402 participants and 93% · Source reports linkage possible for 22,402 participants and 93%; denominator should be confirmed by cohort owner. | Field-cited |
| No response selected | No notes |
Linkage and access
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
NHS linkage Recommended | Yes | Field-cited |
| No response selected | No notes |
GP linkage Recommended | Yes | Field-cited |
| No response selected | No notes |
Death registry linkage Recommended | Yes | Field-cited |
| No response selected | No notes |
Education linkage Recommended | No | Field-cited |
| No response selected | No notes |
Data access mechanism Recommended | direct_application | Field-cited |
| No response selected | No notes |
TRE platform Recommended | No value held | Not published |
| No response selected | No notes |
Data dictionary URL Recommended | https://generation-scotland.ed.ac.uk/for-researchers/access | Field-cited |
| No response selected | No notes |
Data access timeline (days) Recommended | No value held | Not published |
| No response selected | No notes |
Data access cost Recommended | No value held | Not published |
| No response selected | No notes |
Participant profile and dates
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Age distribution Recommended | mean_age_49: 1 | Field-cited |
| No response selected | No notes |
Sex distribution Recommended | male: 0.41; female: 0.59 | Field-cited |
| No response selected | No notes |
Ethnicity distribution Recommended | No value held | Not published |
| No response selected | No notes |
Smoking status distribution Recommended | No value held | No source yet | No citation linked to this field yet. | No response selected | No notes |
Median age Recommended | 49.0 | Field-cited |
| No response selected | No notes |
Percent female Recommended | 59.00 | Field-cited |
| No response selected | No notes |
Percent non-white Recommended | 1.10 | Field-cited |
| No response selected | No notes |
Geographic coverage Recommended | national | Field-cited |
| No response selected | No notes |
Follow-up duration Recommended | 19+ years (2006-present) | Field-cited |
| No response selected | No notes |
Last data collection date Recommended | No value held | Not published |
| No response selected | No notes |
Recruitment start date Recommended | 1 Feb 2006 | Field-cited |
| No response selected | No notes |
Recruitment end date Recommended | No value held | Not published |
| No response selected | No notes |
Diagnosis areas
Mental health diagnosis areas represented in this cohort.
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Diagnosis area: Major depressive disorder Recommended Confirm this diagnosis area applies and estimated N if shown. | Major depressive disorder · Mood Disorders · est. n=2,346 | Field-cited |
| No response selected | No notes |
Linked sites
Sites contributing participants or data to this cohort.
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Linked site: University of Edinburgh Recommended | University of Edinburgh · Scotland | Field-cited |
| No response selected | No notes |
Linked site: University of Glasgow / NHS Greater Glasgow and Clyde Recommended | University of Glasgow / NHS Greater Glasgow and Clyde · Scotland | Field-cited |
| No response selected | No notes |
Linked site: University of Aberdeen / NHS Grampian Recommended | University of Aberdeen / NHS Grampian · Scotland | Field-cited |
| No response selected | No notes |
Linked site: University of Dundee / NHS Tayside Recommended | University of Dundee / NHS Tayside · Scotland | Field-cited |
| No response selected | No notes |
Verification metadata
Internal catalogue status — for reference only.
| Field | Current value | Evidence | Source evidence | Response | Notes / correction |
|---|---|---|---|---|---|
Verification status Recommended | unverified | Internal | Internal catalogue field | — | — |
Last verified Recommended | No value held | Internal | Internal catalogue field | — | — |
Data source Recommended | No value held | Internal | Internal catalogue field | — | — |